Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943071.1_cds_XP_016486357.1_77202
CDS Infomation

[gene=LOC107806668] [db_xref=GeneID:107806668] [protein=potassium channel SKOR-like isoform X2] [protein_id=XP_016486357.1] [location=complement(join(66209..67360,68168..68374,71324..71405,72450..72517))] [gbkey=CDS]
Sequence

ATGGCCGAACCATCATCTATCATCAAGAAAAGGGTGCTCAAAGATGGGAATCGTCGCCTC
GAGCAGTGGCTCGGTTTCATTTGCTGGATACTGCTGCTGCTGCTTAAAGTGTGTTGCCGT
TGGTTTGCTCGTGAGTTTATTCTGCTCCTAGATATTCCTGCTTCAATTCGAGCTAAGATT
TCGCAAAAGTTGTATGAGCCCTACATCAGAGGAGTCCCACTTTTCAGAGGTTGCTCGCAT
GAATTTATCAAACAGATTGCAATCAAAGTACATGAAGAATTTTTCCTTCCAGGGGAAGTG
ATTATGGAACAGGGTAGCATGGCAGATCAACTGTATTTTGTCTGTCATGGTAAAGTGGAA
GAAGTTAGAAAACCAGAAGAAAATGAAACTGAAGAATCTCTCCTGGATCTTCACACTTAC
AACTCTGTTGGTGAAATTTCTGTTCTTTGTAACATCCCAGTCCCTTATACCGTTCAAGTT
TATGAGTTATCTAGACTGCTACGAATTGATAAACAAGCTCTGGTGGAGATTCTGGGGATA
TACTTCTCTGGCGGGCGTGTAATCATCAATAATCTACTTGAGGGAAGAGAGTCAAGCCTT
CAAAGCAAGATATTGGATTCAGACATAACACTGAATATTGCGAAACATGAATCTGAGCTC
ACGATGAGGTTAAACTGTGCAGCTCACGATGGAGATTTGTATCGTCTAAGTCGTATAATT
GGTGCAGGAGCAGACCCCAGCCGAACTGATTATGATGGAAGATCACCCCTGCATCTAGCT
GCATCCAAGGGACATGGAGATATTACCGTTTTCCTTATCCAAAGAGGAGTGGAGATTAAT
GCTAGAGATAAGTTTGGCTCCACTGCATTGCTTGAAGCGGTTAAGAATGGCCATGATCAA
GTGGCTTCTTTGCTTATGGAAGCAGGGGCACTACTAGGTATAGATAATGATGGGACTTGC
CTTTGTGAGGCAGTCGCGAAAAGAGATCTAGATTATTTGAGAAGACTGTTGGACAGCGGC
ATCAATCCTAATTCCAAAAATTATGACTTTCGAACACCACTTCACCTAGCTGCATCAGAA
GGGCTGTTTCCAATTTCAGTGTTACTGTTAAAAGCTGGGGCTAGTGTCTTTGCAGTGGAC
AGGTGGGGAAGAACTCCACTTGATGAAGCTCGAGTAGGTGGAAACAAGAATCTTATTAAG
CTACTGGAAGATGCACATGGTAGTCAACTGTCAGAATTTTCTACGAGCTTTGGAAAACAA
GATGAAGGGCAGCGGGTTAGATGTAGAGTGTTCACTTCAGACCCCAGGAGTCTCAAAAAC
GAGAGAAGAAGAGTAGTTCTATGGGTACCACAAAGCATTGATGAGCTCATTAACACAGCT
AAGGCGCAGTTGAGAGTTTCATCAGCAAATTGTGTAGTCTCAGAAGATGGAGCCAAGATC
CTGGACACAGACATGATATCTGATGGTCAAAAACTGTTTTTAGTTAGGGAAATCACACTA
AGTCTCTAA

Peptide Sequence

PEP ID

XP_016486357.1
PEP Infomation

PREDICTED: potassium channel SKOR-like isoform X2 [Nicotiana tabacum]
Sequence

MAEPSSIIKKRVLKDGNRRLEQWLGFICWILLLLLKVCCRWFAREFILLLDIPASIRAKI
SQKLYEPYIRGVPLFRGCSHEFIKQIAIKVHEEFFLPGEVIMEQGSMADQLYFVCHGKVE
EVRKPEENETEESLLDLHTYNSVGEISVLCNIPVPYTVQVYELSRLLRIDKQALVEILGI
YFSGGRVIINNLLEGRESSLQSKILDSDITLNIAKHESELTMRLNCAAHDGDLYRLSRII
GAGADPSRTDYDGRSPLHLAASKGHGDITVFLIQRGVEINARDKFGSTALLEAVKNGHDQ
VASLLMEAGALLGIDNDGTCLCEAVAKRDLDYLRRLLDSGINPNSKNYDFRTPLHLAASE
GLFPISVLLLKAGASVFAVDRWGRTPLDEARVGGNKNLIKLLEDAHGSQLSEFSTSFGKQ
DEGQRVRCRVFTSDPRSLKNERRRVVLWVPQSIDELINTAKAQLRVSSANCVVSEDGAKI
LDTDMISDGQKLFLVREITLSL

Transcript Sequence

Gene sequence data has not been registered.